PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO69187
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family B3
Protein Properties Length: 282aa    MW: 31477 Da    PI: 10.4746
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO69187genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.53.2e-1016103192
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
               f k+l++ dv++++  ++p k+++  +  ++++   ++ed sg  W++ + y  +k+  +  l +GW  Fvk+ +L++gD v+++ +++++++ 
  OMO69187  16 FSKILSQTDVTRRC--SVPMKYFKLRS-FPKSP--FVVEDDSGCLWRLCC-YirSKNHPKPALVSGWVPFVKSMKLRVGDRVLIYAEQDETGST 103
               8899*9*****999..99***994444.34455..99***********99.5244444459999*********************887655533 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MAIFSKILSQ TDVTIFSKIL SQTDVTRRCS VPMKYFKLRS FPKSPFVVED DSGCLWRLCC  60
YIRSKNHPKP ALVSGWVPFV KSMKLRVGDR VLIYAEQDET GSTRYKIKVQ KQTFPSKVRG  120
SHTRKNHDRM KVSPSQSDNG STQTTIQPSG YPFPCVLNHG HGRTTAMTSS HTNKEQTPTK  180
HSTSQGISCH KTEGPSPSLS LESTQKATMT GRTAAATSSS TDKKHMTTPH SSRRNMALYK  240
TEIPSPNLSL ELSLKPTLTE CQQHAYMQKT IPKTIDFLAG FS