PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO69276

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bHLH

Protein Properties

Length: 75aa MW: 8644.62 Da PI: 10.8441

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO69276	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2e-11	43	72	1	30
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPka 30 ++ +hn+ Er RR++iNs f+ Lr+llP + OMO69276 43 KKLNHNAKERDRRRQINSLFSSLRSLLPAS 72 6789************************84 PP

Sequence ? help Back to Top
Protein Sequence Length: 75 aa Download sequence
MAHEQKKNFY KDNKNVFQYF NPSSKSQSID QSAASTSNPN VAKKLNHNAK ERDRRRQINS 60 LFSSLRSLLP ASDQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56970.1	4e-16	bHLH family protein

Link Out ? help Back to Top
Ensembl	OMO69276