PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO70528

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 179aa MW: 20304.7 Da PI: 8.2088

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO70528	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.8	4.7e-13	112	154	6	48
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 + rk kNReAArrs Kka+i++Le +v+eL ++N L k OMO70528 112 AHLRKLKNREAARRSFDQKKAYIQQLELEVQELRKQNANLMKS 154 568***********************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MDQIKNEKDQ NIQGFDLNKL LEDAEAFERV FFPPDDQSPD NHYVNQYCID FNELSQILNE 60 GNSCDHGQID NNGGCHGNIM QQPVDQIANG LQGNVKQSGR GRRCKQFCPV AAHLRKLKNR 120 EAARRSFDQK KAYIQQLELE VQELRKQNAN LMKSFLVYAS ASSSGKGQKY LRRTASGPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36270.1	3e-07	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO70528