PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO71359
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family NAC
Protein Properties Length: 72aa    MW: 8443.8 Da    PI: 9.8936
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO71359genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM22.43.3e-07638133
       NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleev 33
              +p G+rF P+ ee+ ++yL + ++g++++ +ev
  OMO71359  6 MPHGVRFYPEKEEIFSYYLYPAINGESIPYAEV 38
              699***********************9887543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MSEIVMPHGV RFYPEKEEIF SYYLYPAING ESIPYAEVDK RKSPGICLNG TKTPLKLKPN  60
RFGYFTKRVD RR