PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO73034
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family C2H2
Protein Properties Length: 250aa    MW: 27635.6 Da    PI: 9.5935
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO73034genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000453153123
              EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
              +kC+ C++ F++   L  H+  H
  OMO73034 31 HKCSRCTRNFNSATALFGHQTAH 53
              79*****************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MDAAALASLK GKTVAQSEEE PETVEPNPNP HKCSRCTRNF NSATALFGHQ TAHRIFSDPR  60
RISPVMAAVL HNPLPGDKSD IVIAKMMEKA NLQQQLLPSA GGRNQSPPRF HPYRRIHQEP  120
PPVQNPEINP IICNPVAAAS EGEISFVQKL LRQKEPVNYI EPRYVHRHPF ERDELVAPPL  180
VAAPQRGVTM DLVGLGEWAP LRAGFGENDH HLELRLGTSV GVDTSLALQI GPRRRRSTAP  240
RLDLKLKLGS