PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO73047
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family NAC
Protein Properties Length: 275aa    MW: 30807.8 Da    PI: 4.2935
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO73047genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.72.9e-1221105176
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........kvkaeekew...yfFskrdkkyatgkrknr 76 
               +p G+rF+P+d++l+v+yLk+k+ +++l+  ++i++v++y++ P+ L +        +v+   ++w     + k++ k++ g+ + r
  OMO73047  21 VPIGYRFKPRDDQLIVHYLKPKAYNQPLPP-NTIEDVELYSYSPEALTRnffvspfySVSM-LDNWvlcKVYNKKQGKNQDGETSGR 105
               589************************999.78**************84466666542222.2244222456666666666666555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEEAASSSRQ PLGSRKAKIN VPIGYRFKPR DDQLIVHYLK PKAYNQPLPP NTIEDVELYS  60
YSPEALTRNF FVSPFYSVSM LDNWVLCKVY NKKQGKNQDG ETSGRGTTAD EDEGEDDGDG  120
GAPPSKEEEE EEQQSSSITN AASPQIAVDQ KQNHQHYNNM MMLLQSSYPP EMPYYSNNGY  180
DNGASTFGFS DFSGCLGLGQ DLACYGNFVP KSSILPPPDP DQFDPTGSKY PLNMMITDPS  240
FTDDERNYLL ELLEKLNTNN SFNNGLEDKN TNKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-09NAC family protein