PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO73337
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 357aa    MW: 40515.4 Da    PI: 7.2737
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO73337genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.7e-1072112340
               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS
    bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40 
                +k  rr+++NReAAr+sR+RKka++++Le    k ++Le+
  OMO73337  72 TDKIKRRLAQNREAARKSRLRKKAYVQQLESsrlKLAQLEQ 112
               68999*************************83333444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MSSPATELTR MAIYEQYHQI SRWGDAFNNN DSPNTGSSTI VQVDVRLDNK AEYISSDQVE  60
PSRSDQEANK PTDKIKRRLA QNREAARKSR LRKKAYVQQL ESSRLKLAQL EQELERARQQ  120
GIYISSASDT GYFGLSGTVN SGITAFEMEY GHWVEEQNKQ ICELRSALQA HITDIELRIL  180
VESSLNHYCN LFRMKADAAK ADVFYLFSGI WRTSAERFFH WIGGFRPSEL LNVVMSQIEP  240
LTDQQHLEVF NLRQSSQQAE DALSQGIDKL QQNLAQSVAA DLSSGNYRAQ MAAAVDKLEA  300
LEGFVNQADH LRQQTLQQMA RILTTRQAAR GLLALGEYFH RLRALSSLWA ARPREPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-160bZIP family protein