PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO73388
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family NAC
Protein Properties Length: 89aa    MW: 10203.2 Da    PI: 3.9484
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO73388genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM401.2e-124388147
       NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL 47
              lppGfrF P+d el+ +yL kkv++++l++ ++i++v++y+ +P+ L
  OMO73388 43 LPPGFRFCPEDIELIEDYLMKKVNHEELPC-DIIRQVKLYEQDPSVL 88
              79****************************.99***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MEENNYNPQQ FPSAAAANYS SSNSLIIHND ESDQEAAMNN NNLPPGFRFC PEDIELIEDY  60
LMKKVNHEEL PCDIIRQVKL YEQDPSVLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.16e-11NAC family protein