PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO74087

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 185aa MW: 20882.9 Da PI: 9.9667

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO74087	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.2	2.3e-15	107	159	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ ee+ ++ + OMO74087 107 RRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNQELQKKQEEIMEMQK 159 79********************************************9999865 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MGSHLNFKNF GEVAPTMEDN GSKPLGNFPL ARQSSIYSLT FDELQSTFGG LGKDFGSMNM 60 DELLKNISSA EETQGLMTAS VAAGEGVPYV FGRGRKCSAA LEKVVERRQR RMIKNRESAA 120 RSRARKQAYT LELEAEVAKL KEMNQELQKK QEEIMEMQKN QMLETLNRPW GGKRQCLRRT 180 LTGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.1	3e-43	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO74087