PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO74167
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family B3
Protein Properties Length: 100aa    MW: 11471.4 Da    PI: 10.7031
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO74167genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.97.7e-1315733288
              --SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
        B3 32 esktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88
              + ++l+++d  sg  W++++ + +++  + v++kGW +Fv++++Lk+gD v F+ ++++
  OMO74167 15 NAMELQVKDaNSGSLWQFRVFVrKNNYLKPVFSKGWCNFVQSKNLKVGDKVKFYKEEDD 73
              57899****9999*******6645555569************************65542 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MKCFASFPRF KDGRNAMELQ VKDANSGSLW QFRVFVRKNN YLKPVFSKGW CNFVQSKNLK  60
VGDKVKFYKE EDDQGSGAQF KIKAKKAVKI FGVVFGYAKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.11e-06B3 family protein