PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO74219
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 381aa    MW: 42675 Da    PI: 7.8968
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO74219genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.55.8e-082462921763
               HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
               A+rsR RK+++i+eLe+ v++L+ae ++   ele l+++   l +e+
  OMO74219 246 AQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMEN 292
               89***********************************9998887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MANSKGSTNI RNLMFAGKHA LLPPKSPFPT VSPAYTDYIP NNLIGSKTAQ KPREGNPNHQ  60
RTSSESLLIE EQPSWLDDLL NEPETPVRRG GHRRSSSDSF AYIDVANTPN LDYAAQDEYR  120
YQNMISAPSW ASQEYDYHGR KDSRLTSFYT DVNLVKQKNR AWDSSLNAVT HPSGHLSVRE  180
NTILQGLGSS CAPQEVEGAP STASEKQDSA DSATPDTKSS SEKKDSHSKS SASDSDTTKR  240
AKQQFAQRSR VRKLQYIAEL ERNVQALQAE GSEVSAELEF LNQQNLILSM ENKALKQRLE  300
SLAQEQVIKY LEQEVLEREI GRLRVMYQQQ KHQQQPKQQQ KPSSGHRRSS SRDLDSQLAN  360
LSLNHKDASS SHDSVTGPLH I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.11e-105bZIP family protein