PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO74421

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 592aa MW: 64747.2 Da PI: 6.6422

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO74421	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.6	3.5e-10	432	489	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ + l+++ OMO74421 432 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 489 9********************************************9998877666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 592 aa Download sequence
MGDSEEGNSN TDVMQRIQSS FGTSSSSIPK QPLSMNHLEI PQLNPNQMRA ARHFSHFGQN 60 FNGGEANKRV GIPPSHPNQI PPISPYSQIP VSRQTNQQMG SQSFSPGPTH SRSLSQPSSF 120 FSLDSLPPLS PSPFRDSPSV AVPDQICTDV SMEDRDATSH SLLPPSPFSR GNSMRVGESL 180 PPRKSHRRSN SDIPFGFNTI LQSSPPLLPL RGGGGLERSL SGKENSEVPK PIQLVKKETS 240 WERSGDANAE GVGERKSEGE VVDDLFSAYM NLDTIDALNS SGTDDKNNGN DNHEDLDSRA 300 SGTKTNGGDS SDNEAESSVN ESGNSGHRGR MNSTEKREGI KRSAGGDITP ASRHYRSISM 360 DSFMEKLNFG DESPKLPPSP GNRPGQLSPT NSIDGNSAAF SLEFGNGEFS GAELKKIMAN 420 EKLAEIAMAD PKRAKRILAN RQSAARSKER KMRYISELEH KVQTLQTEAT TLSAQLTLLQ 480 RDSVGLTNQN NELKFRLQAM EQQAQLRDAL NEALTAEVRR LKIVTQELGG DSDPSKGMVS 540 QQLSVNHQMF QLHQQQSSQL NIPHQFQQQQ QQQPPQPQQQ NGNTTTKSES NQ

Sequence ? help Back to Top

Protein Sequence Length: 592 aa Download sequence

MGDSEEGNSN TDVMQRIQSS FGTSSSSIPK QPLSMNHLEI PQLNPNQMRA ARHFSHFGQN  60
FNGGEANKRV GIPPSHPNQI PPISPYSQIP VSRQTNQQMG SQSFSPGPTH SRSLSQPSSF  120
FSLDSLPPLS PSPFRDSPSV AVPDQICTDV SMEDRDATSH SLLPPSPFSR GNSMRVGESL  180
PPRKSHRRSN SDIPFGFNTI LQSSPPLLPL RGGGGLERSL SGKENSEVPK PIQLVKKETS  240
WERSGDANAE GVGERKSEGE VVDDLFSAYM NLDTIDALNS SGTDDKNNGN DNHEDLDSRA  300
SGTKTNGGDS SDNEAESSVN ESGNSGHRGR MNSTEKREGI KRSAGGDITP ASRHYRSISM  360
DSFMEKLNFG DESPKLPPSP GNRPGQLSPT NSIDGNSAAF SLEFGNGEFS GAELKKIMAN  420
EKLAEIAMAD PKRAKRILAN RQSAARSKER KMRYISELEH KVQTLQTEAT TLSAQLTLLQ  480
RDSVGLTNQN NELKFRLQAM EQQAQLRDAL NEALTAEVRR LKIVTQELGG DSDPSKGMVS  540
QQLSVNHQMF QLHQQQSSQL NIPHQFQQQQ QQQPPQPQQQ NGNTTTKSES NQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-144	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO74421