PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO74506
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 262aa    MW: 28508.8 Da    PI: 6.0947
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO74506genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.51.2e-0786135251
               XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
               +e k  +r   NReA r++R++ ka+ + Le++v  L a N++L k+l+ 
  OMO74506  86 REKKSKKRPLGNREAVRKYREKVKARAASLEDEVVRLRALNQQLLKRLQG 135
               5678899999***********************************99974 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MDDGELDFSN QEVFTGNNMG DVPSSCSMDS FFDELLNDSH ACTHTHTCNP PGPDNSHTHT  60
CFHVHTKIVP AATEDKATTD DTAGSREKKS KKRPLGNREA VRKYREKVKA RAASLEDEVV  120
RLRALNQQLL KRLQGQAALE AEVARLKCLL VDIRGRIEGE IGAFPYQKST TNVNMMNMPV  180
AYVVNSCNVP CNDQMYCLHP GVEEKAGEDA ALNGQEFSGC EFDNLPCLGN QNSGVKELAT  240
CGVGSAASNG NSSGTKRRKG EI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.11e-106bZIP family protein