PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO74682
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family C2H2
Protein Properties Length: 69aa    MW: 7908.89 Da    PI: 8.9776
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO74682genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000271836321
              ETTTTEEESSHHHHHHHHH CS
   zf-C2H2  3 CpdCgksFsrksnLkrHir 21
              C++C+k F + +  + H++
  OMO74682 18 CNICKKNFGSLDAVMEHQK 36
              *****************98 PP
2zf-C2H213.50.000224669123
              EEETTTTEEESSHHHHHHHHHH.T CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
              ykC +C++ F +k+  + H ++ H
  OMO74682 46 YKCDKCNRGFETKEAPTEHRNNgH 69
              9************98888887766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    
MASNAKENVS RKDYDGFCNI CKKNFGSLDA VMEHQKVALN KKETKYKCDK CNRGFETKEA  60
PTEHRNNGH