PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO74723
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family BES1
Protein Properties Length: 325aa    MW: 34853.7 Da    PI: 8.0696
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO74723genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822217.72.6e-6721451150
    DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkss 101
               ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g+sa+asp+ss++      
  OMO74723   2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPVERMDIVGASATASPCSSYH------ 96 
               5899*******************************************************************************************...... PP

    DUF822 102 alaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                 +sp++sy++sp+sssf sp+s++ + + +   +sl+p+l++ls++sss+
  OMO74723  97 --PSPCASYNPSPASSSFASPASSSYVVNPNGdgNSLIPWLKNLSSASSSA 145
               ..******************99998887665577**********9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPVERM DIVGASATAS PCSSYHPSPC ASYNPSPASS SFASPASSSY  120
VVNPNGDGNS LIPWLKNLSS ASSSASSSKH PHLYIHGGSI SAPVTPPLSS PTARTPRIKT  180
DWEDQSGHPG WNAQQHSFLP SSTPPSPGRQ ILPDPEWFAG LQIPRSGATS PTFSLVSSNP  240
FGFKDEVMAG GGSRMWTPGQ SGTCSPAIAA GVDQTADVPM SEVVSDEFAF GNNATGLVKP  300
WEGERIHEEC GSDDLELTLG SSRTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-128BES1 family protein