PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO75181
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family B3
Protein Properties Length: 118aa    MW: 13804.1 Da    PI: 10.4448
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO75181genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3421.6e-1312103995
               HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE...EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..EEE CS
        B3   9 dvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy.rkksgr..yvltkGWkeFvkangLkegDfvvFkldgr..sefelvvk 95 
               d   s+r++lp k + ++    +gk e  ++  ++d  +g + ++++ y rk+++    v+tkGW++Fv +++L++gD v F+l+++  s  +++vk
  OMO75181  12 DI--SKRFTLPSKSL-KYfprlSGK-EHMVDFDVRDdDDGHVRKFRV-YtRKGKKYlkPVITKGWRDFVCSKELQVGDKVAFYLEEEqaSPVKYRVK 103
               33..4568******9.555997444.456778888856676666666.314444446699***********************98532455555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MAIVEKSLKQ TDISKRFTLP SKSLKYFPRL SGKEHMVDFD VRDDDDGHVR KFRVYTRKGK  60
KYLKPVITKG WRDFVCSKEL QVGDKVAFYL EEEQASPVKY RVKVQKQVKI FGAVVFTP