PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO75233
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family B3
Protein Properties Length: 358aa    MW: 39727.4 Da    PI: 5.0789
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO75233genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3322.2e-106653597
              EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS
        B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97
              t++l++ + + W+v++  +++ g++++ kGW++F ++n+++e+ ++vF  +g  s f   v+vf
  OMO75233  6 TVILRNCNCQCWQVEV--NNCAGKMYFDKGWRKFIHENNIEEKHILVFINHGGsSVF--DVTVF 65
              78999999999*****..******************************955543555..66666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MFATATVILR NCNCQCWQVE VNNCAGKMYF DKGWRKFIHE NNIEEKHILV FINHGGSSVF  60
DVTVFGANNC TKIVSPRVSK EQEVEFVDLV DDDEEEEEEK EEEQEQDEEW NDEGTNSMKG  120
EDKELDIERY INHPNPYFVV KKSSAGRENE LVCFLLLVLI SYINELGLPA QMVPNNVIRV  180
HELTLEDKED ITFIGLHNQK TIGKVKKWKD GRTVITGWSN FCYKNMQRLI IIAMATASAT  240
LRPITIAAAT AASPRRRGGV NVKYITGLNA FSGLKAHNNV VSLGLPVCTE QCFAKLVSSL  300
KASSNGKKGG ALASTCSAVG EIFRIAAIMN GLVLVGVAVG FVLLRIEASV EEAEGELF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06160.13e-06B3 family protein