PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO75238
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family ZF-HD
Protein Properties Length: 184aa    MW: 20065.5 Da    PI: 7.2125
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO75238genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer62.77.7e-203995556
  ZF-HD_dimer  5 rYkeClkNhAaslGghavDGCgEfmpsegee.gt....aaalkCaACgCHRnFHRre 56
                  Y eC++N   s+Gg+ vDGC  f+ +  +  g+     +a+ C+ CgCHRnFHR+ 
     OMO75238 39 LYMECRRNYISSIGGNIVDGCEKFVRNGAAVgGDrnqtREAFYCSKCGCHRNFHRKI 95
                 69***********************984433333445599***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MEKSSNIDQT NAASNGALPP SRPNSSLPGT NRGGAAPPLY MECRRNYISS IGGNIVDGCE  60
KFVRNGAAVG GDRNQTREAF YCSKCGCHRN FHRKIVLPRL PANLPEETKR NCIMNFLRKQ  120
FSLTLPLPIT APWLMRSTTT PPNTDNDLVE GQGSSLSPGG EEAEEKSESD SGDEITQPLK  180
IKEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.13e-13ZF-HD family protein