PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO76157
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 286aa    MW: 31151.2 Da    PI: 4.5154
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO76157genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.92.7e-3079137259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
               +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp++++itY+ eHnh+
  OMO76157  79 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPTMLVITYSCEHNHP 137
               69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDGGFNKARN NPFASDQQFD DNDNVSSETG SESPTSTTFN DMKLASPKKG RRSIQKKVVS  60
VPIKDVEGSR LKGEGAPPSD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR  120
VDPTMLVITY SCEHNHPWPA SRNNNNAAKQ AAAAAAAAAA AAAAASEEVE VEVETTTTSA  180
VVKSEPSTSQ PDTELESATE EKFADLTDDS ILTTADEFAW FGEMETTSST VLESPIFAER  240
DNSADVAMIF PMREEDESLF ADLDELPECS FVFRHQRNVG PQVGIC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15157RRSIQKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-84WRKY family protein