PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO76202

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 172aa MW: 19021.7 Da PI: 9.5452

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO76202	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.2	4.3e-39	45	103	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk k OMO76202 45 PDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKP 103 68999***************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MVMASQEGQG IKLFGTTITL HGRQQVKEEQ INKGDVNNPS LDKRPDKIIP CPRCKSMETK 60 FCYFNNYNVN QPRHFCKGCQ RYWTAGGALR NVPVGAGRRK AKPPGRGLGG FPDGCLYDGS 120 SDHEVVQSQF ELEGMVLAAD EWHVAAAAAN GGFRQVFPMK RRRISCSGGQ PY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	164	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29160.1	3e-58	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO76202