PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO77564
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family E2F/DP
Protein Properties Length: 279aa    MW: 31554.6 Da    PI: 9.8204
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO77564genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP74.89.2e-2457137171
   E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
               r+eks++lltq+f+kl+ +s+ + ++l+e+ak L+ +      +++k+RR+YDi+NVL+++nliek     ++k+++rw g
  OMO77564  57 RREKSMGLLTQNFVKLFVCSNIELISLDEAAKLLLGNahntsIMRTKVRRLYDIANVLSSMNLIEKthtldTRKPAFRWLG 137
               689********************************999***999***********************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MALSSSSSLP DSSSRHYAYS RKQKSLGLLC SNFLSLYNND GVDLIGLDEA AARLDNRREK  60
SMGLLTQNFV KLFVCSNIEL ISLDEAAKLL LGNAHNTSIM RTKVRRLYDI ANVLSSMNLI  120
EKTHTLDTRK PAFRWLGYGE NSEKRSAAAV ALDESRKRAF GTDLTNICSK RNKGDTCNDV  180
NRCMKMQKQI NVENRSSLED SQQGPKSYQF GPFAPVNLAN IGNSANNVKR IHDWERLAST  240
YRPQYHNQAL RDLFSHYNEA WKSWYTEVAG KKTTIQQIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.25e-82E2F/DP family protein