PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO78054
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family NAC
Protein Properties Length: 70aa    MW: 8070.26 Da    PI: 4.8199
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO78054genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM23.21.9e-07348242
       NAM  2 ppGfrFhPtdeelvveyLkkkvegkk....leleev.ikevdiykv 42
              ppG+ F+P+d+e+v++yL k +eg+     l  ++  +k +++y++
  OMO78054  3 PPGYVFDPSDKEIVTFYLPKLIEGNGsldfLGYFKYlFKVCNVYST 48
              8**********************99865542223332444566554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    
MSPPGYVFDP SDKEIVTFYL PKLIEGNGSL DFLGYFKYLF KVCNVYSTAA RPSLLLDFDM  60
NYKNDNMFHA