PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO78783

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

BES1

Protein Properties

Length: 655aa MW: 73486.5 Da PI: 6.7473

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO78783	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	148.4	5.7e-46	30	168	1	132
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl.eeaeaagssas..aspesslq 95 gg++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++ +gs+p +++ + ss+s +s++++ + OMO78783 30 GGARRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsQGSRPAgGTSAGMTSSSSqmVSQQTPPS 130 6899***************************************************************98888999998444444444433478888877 PP DUF822 96 .sslkssalaspvesysaspksssfpspssldsislas 132 ++ ss ++ ve ++++k + +p ps +d s a OMO78783 131 sLRGISSGYRTSVEYNACRMKGVFMPTPSPYDLSSGAR 168 78889************************9887764 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MGVDGVMPSP SSTGQYQQQL QEQVSTPGGG GARRSRPLEE KERTKLRERH RRAITARILA 60 GLRRHGNYNL RVRADINDVI AALAREAGWV VLPDGTTFPS RSQGSRPAGG TSAGMTSSSS 120 QMVSQQTPPS SLRGISSGYR TSVEYNACRM KGVFMPTPSP YDLSSGARSQ SPGMVGDGGE 180 QTESLPLIAG SMEVVNDKQI MELHPKLPER DFAGTPYVPV YVMLPLGVIN VKCELVDPDG 240 LLKQLRVLKS INVDGVMVDC WWGIVEAHAP QEYNWNGYRR LFQMVRELKL KLQVVMSFHE 300 CGGNVGDDAC IPLPHWVAEI GRSNPDIFFT DREGRRNPEC LSWGIDKERV LRGRTAVEVY 360 FDYMRSFRVE FDEFFEDCII SMVEIGLGPC GELRYPSCPV KHGWRYPGIG EFQCYDQYML 420 KSLRKAAEMR GHSFWARGPD NAGSYNSQPH ETGFFCDGGD YDGYYGRFFL NWYSRVLVDH 480 GERVLSLAKL AFEGTCIAAK LPGIHWWYKT ASHAAELTAG FYNPSNRDGY SAIAAMLQKH 540 GASLNFACAE LHLLEQHEDL REALADPQGL VWQVLNAAWD VCIPVATENA LLCYDRVGYN 600 KILDNVKPLN DPDGRHFSSF TYLRLSPLLM ERQNFMEFER FVKRMHGEAV LDIQV

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MGVDGVMPSP SSTGQYQQQL QEQVSTPGGG GARRSRPLEE KERTKLRERH RRAITARILA  60
GLRRHGNYNL RVRADINDVI AALAREAGWV VLPDGTTFPS RSQGSRPAGG TSAGMTSSSS  120
QMVSQQTPPS SLRGISSGYR TSVEYNACRM KGVFMPTPSP YDLSSGARSQ SPGMVGDGGE  180
QTESLPLIAG SMEVVNDKQI MELHPKLPER DFAGTPYVPV YVMLPLGVIN VKCELVDPDG  240
LLKQLRVLKS INVDGVMVDC WWGIVEAHAP QEYNWNGYRR LFQMVRELKL KLQVVMSFHE  300
CGGNVGDDAC IPLPHWVAEI GRSNPDIFFT DREGRRNPEC LSWGIDKERV LRGRTAVEVY  360
FDYMRSFRVE FDEFFEDCII SMVEIGLGPC GELRYPSCPV KHGWRYPGIG EFQCYDQYML  420
KSLRKAAEMR GHSFWARGPD NAGSYNSQPH ETGFFCDGGD YDGYYGRFFL NWYSRVLVDH  480
GERVLSLAKL AFEGTCIAAK LPGIHWWYKT ASHAAELTAG FYNPSNRDGY SAIAAMLQKH  540
GASLNFACAE LHLLEQHEDL REALADPQGL VWQVLNAAWD VCIPVATENA LLCYDRVGYN  600
KILDNVKPLN DPDGRHFSSF TYLRLSPLLM ERQNFMEFER FVKRMHGEAV LDIQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	BES1 family protein

Link Out ? help Back to Top
Ensembl	OMO78783