PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO78926

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 413aa MW: 44151.3 Da PI: 10.4059

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO78926	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.1	9.2e-09	359	386	5	32
CHHHCHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLe 32 +r+rr++kNRe+A rsR+RK+ae e + OMO78926 359 RRQRRMIKNRESAARSRARKQAEALEMQ 386 79*********************98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MGTNMNFKNF GSSNTPPSTD GGGNKLPTGI PLTRQPSIYS LTFDEFQSSM GGIGKDFGSM 60 NMDELLKNIW SAEETQTMAS STAGVQGNGG LQRQGSLTLP RTLSQKTVDE VWKDISKEYS 120 IGKDGIAAAT TNNMPQTQRQ QTLGEMTLEE FLVRAGVVRE DTQLAGKANN NGGFFGELQQ 180 TQTGNNTGFG IGFQQGNRGQ NFMGNRISEG VNQIGVQASN LPLNVNGVRS NQQQLAQQQT 240 QQQHHQHQQP IFPKQPAMTY GAQIPLQSGG QLGSPGIRGG IAGIGDQGLT NGLLHGGGMG 300 MVGLGGAVTV ATGSPANQLS SDGIGKSSGD TSSVSPVPYV FNGSLRGRKS SAVEKVVERR 360 QRRMIKNRES AARSRARKQA EALEMQKNQV MEMINMEQGG KKRCLQRTQT GPW

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MGTNMNFKNF GSSNTPPSTD GGGNKLPTGI PLTRQPSIYS LTFDEFQSSM GGIGKDFGSM  60
NMDELLKNIW SAEETQTMAS STAGVQGNGG LQRQGSLTLP RTLSQKTVDE VWKDISKEYS  120
IGKDGIAAAT TNNMPQTQRQ QTLGEMTLEE FLVRAGVVRE DTQLAGKANN NGGFFGELQQ  180
TQTGNNTGFG IGFQQGNRGQ NFMGNRISEG VNQIGVQASN LPLNVNGVRS NQQQLAQQQT  240
QQQHHQHQQP IFPKQPAMTY GAQIPLQSGG QLGSPGIRGG IAGIGDQGLT NGLLHGGGMG  300
MVGLGGAVTV ATGSPANQLS SDGIGKSSGD TSSVSPVPYV FNGSLRGRKS SAVEKVVERR  360
QRRMIKNRES AARSRARKQA EALEMQKNQV MEMINMEQGG KKRCLQRTQT GPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-114	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO78926