PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO79957
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 279aa    MW: 30431.8 Da    PI: 5.4525
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO79957genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.16e-16208252448
               XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                +++rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L +e
  OMO79957 208 QQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEENARLLNE 252
               689*************************************99843 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MASSKVITTT SQTNPDLPRQ PSLCSSLSTL LADLQNQQNH NNQNQSLNGF GSMSMDDLLK  60
NIYSSPPPPP TTTDVHAQFP GASISRDGSF SLPKDVANKS VDEVWKEIVA GGPDQRQGGA  120
SEEMTLEDFL TKAGAVREED VRGAVNQVGE GAGVYAMDPA VINGAGGQFS AFGNNGSVDH  180
QRLVAPAGGG GRGKRRAVEE PPLDKATQQK QRRMIKNRES AARSRERKQA YTVELESLVT  240
QLEEENARLL NEELMENLIP VEEQQRAPRV LRRIHSMQW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.13e-28bZIP family protein