PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO81118
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family ERF
Protein Properties Length: 230aa    MW: 25259.9 Da    PI: 5.151
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO81118genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-19554154
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
              ++y+GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  + 
  OMO81118  5 KKYRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDQAAILMS 54
              59*******9.**********8.....334*********************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MVQAKKYRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAARAYDQAA ILMSGRNAKT  60
NFPISQTGNG DSKSGNEINN PNSSSSSSSS IISAPNDLSE LLHAKLRKCS KAPSPSMTCL  120
RLDTENSHIG VWQKRAGQSS DSNWVMTVQL GKGSNPNGDH DQVSANNAIL MPDIIPNSSS  180
PEELATESSA EMRGEIDEEE RIALQMIEEL LNRNTSCSSF GVDDQEGEDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.13e-69ERF family protein