PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO81675

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bHLH

Protein Properties

Length: 59aa MW: 6931.01 Da PI: 10.5554

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO81675	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.7	6.5e-11	3	32	1	30
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPka 30 ++ +hn+ Er RR+++N+ ++ Lr+llP a OMO81675 3 KKLNHNASERDRRRKVNNLYSSLRSLLPAA 32 6789************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 59 aa Download sequence
MVKKLNHNAS ERDRRRKVNN LYSSLRSLLP AAAQLMVERI SNYNVESEVL REKLLSLFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56980.1	2e-14	bHLH family protein

Link Out ? help Back to Top
Ensembl	OMO81675