PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO82153

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 578aa MW: 64037.3 Da PI: 6.8731

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO82153	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24	8.4e-08	247	304	1	58
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 eke kr rr NRe+Ar +R++a +e+L+ kv+ L+ eN+ Lk e ke+++ OMO82153 247 EKEAKRLRRILANRESARQTIRRRQALCEQLTLKVADLTRENENLKRAKELALKEYKS 304 89*******************************************9544444455555 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MDLERCYSSS LLASTPGDAA GDAEAVSTDR MEIEAAEILA ALAHSKKQDA AAVAAEFAAK 60 WGCKGKRVRR RVSSSSESPP SDVGLNPVDP VQLGSDLAED RATLDQHQLQ LAGTTVVIKS 120 VEAEENAKPL NTSYTSTARF TSNGVVKFKQ NVTEAEKETC RLYRMLSHKE SDWEMIRERQ 180 ILLGIVGMPE KDIWEDRKPD QLTGNDVFIK SVKDEQDAES VKESSTCASK YMSGGGGRSR 240 QNLTEAEKEA KRLRRILANR ESARQTIRRR QALCEQLTLK VADLTRENEN LKRAKELALK 300 EYKSQESANK DLKAQMAKAI KAEEKEATGE IKLSHQISGS SGNYPFFFYN NQHPFPPFCW 360 PSIVQSSHTV QSQFGHQNNN VVPLSISPPT NGGFDSSHDH ENSINVDGPK TPLYVVPYPW 420 FFSLPDHGNG LHLQSSCGPK SIDEESTVNN RSSSVCSLKS SVVHEEKFNL SLPVEVEKEA 480 YCSFESSPNN LTQVRPTPDG DGATYLEQEN KTDHVAYSEG ASVRACHSVG ALPEENPEST 540 KYLNKNVTDV TAAAEARKRR KELTKLKNQN GRQCRTRR

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MDLERCYSSS LLASTPGDAA GDAEAVSTDR MEIEAAEILA ALAHSKKQDA AAVAAEFAAK  60
WGCKGKRVRR RVSSSSESPP SDVGLNPVDP VQLGSDLAED RATLDQHQLQ LAGTTVVIKS  120
VEAEENAKPL NTSYTSTARF TSNGVVKFKQ NVTEAEKETC RLYRMLSHKE SDWEMIRERQ  180
ILLGIVGMPE KDIWEDRKPD QLTGNDVFIK SVKDEQDAES VKESSTCASK YMSGGGGRSR  240
QNLTEAEKEA KRLRRILANR ESARQTIRRR QALCEQLTLK VADLTRENEN LKRAKELALK  300
EYKSQESANK DLKAQMAKAI KAEEKEATGE IKLSHQISGS SGNYPFFFYN NQHPFPPFCW  360
PSIVQSSHTV QSQFGHQNNN VVPLSISPPT NGGFDSSHDH ENSINVDGPK TPLYVVPYPW  420
FFSLPDHGNG LHLQSSCGPK SIDEESTVNN RSSSVCSLKS SVVHEEKFNL SLPVEVEKEA  480
YCSFESSPNN LTQVRPTPDG DGATYLEQEN KTDHVAYSEG ASVRACHSVG ALPEENPEST  540
KYLNKNVTDV TAAAEARKRR KELTKLKNQN GRQCRTRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	557	562	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	5e-48	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO82153