PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO82183

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 433aa MW: 47171.6 Da PI: 9.0993

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO82183	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44	4.7e-14	348	399	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r+rr++kNRe+A rsR+RK+a++ eLe + +L++eN +Lk+ l el+ + OMO82183 348 RRQRRMIKNRESAARSRARKQAYTVELEAELNQLKQENAQLKQALAELERKR 399 79*******************************************9999765 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MVVTESEIGE VESALQEVDQ QQKNHPFSSL GRQSSIYSLT LDEFQHTLCE SGKNFGSMNM 60 DEFLTSIWNA EENQAINSNQ NNNNNTPIKQ VSSSSNLNLS LSETVISSKG IAKQPSLPRQ 120 GSLTLPAPLC RKTVDEVWSE IHRGQQGQGQ GQGQNSNNNN SNVQSTSENN TNTNNNASTR 180 QPTFGEMTLE DFLIKAGVVR EQNMPPSAPP PPPPPQPQYG LYQTSNNASV GQGFVPRPIM 240 AMGSNGGGFG GNAYHQTMAA TGGVMGDASG YQAAPPQPAA VCYNGKVAAG GGYAPGPGMG 300 VVAPMSPVSS EGMCNSQVDN AANQFGMDLG LRGRKRIIDG PIEKVVERRQ RRMIKNRESA 360 ARSRARKQAY TVELEAELNQ LKQENAQLKQ ALAELERKRK QQYFEEWKMK TQTKAQKAKE 420 KLRVIRRNLS CPL

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MVVTESEIGE VESALQEVDQ QQKNHPFSSL GRQSSIYSLT LDEFQHTLCE SGKNFGSMNM  60
DEFLTSIWNA EENQAINSNQ NNNNNTPIKQ VSSSSNLNLS LSETVISSKG IAKQPSLPRQ  120
GSLTLPAPLC RKTVDEVWSE IHRGQQGQGQ GQGQNSNNNN SNVQSTSENN TNTNNNASTR  180
QPTFGEMTLE DFLIKAGVVR EQNMPPSAPP PPPPPQPQYG LYQTSNNASV GQGFVPRPIM  240
AMGSNGGGFG GNAYHQTMAA TGGVMGDASG YQAAPPQPAA VCYNGKVAAG GGYAPGPGMG  300
VVAPMSPVSS EGMCNSQVDN AANQFGMDLG LRGRKRIIDG PIEKVVERRQ RRMIKNRESA  360
ARSRARKQAY TVELEAELNQ LKQENAQLKQ ALAELERKRK QQYFEEWKMK TQTKAQKAKE  420
KLRVIRRNLS CPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36270.1	1e-113	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO82183