PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO82822
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 286aa    MW: 31749.8 Da    PI: 7.0742
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO82822genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.23.6e-08152188541
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 
               k+ +r ++NR++A+rsR +++  + e ++k++e +ae
  OMO82822 152 KKLKRVISNRLSAQRSRVKRLDHVSEMQRKADEYQAE 188
               899*****************************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDQEMMNNTN VNLQLQPGVP QNPNPFTLMS PTYLPKAPTS FQVWQRPYFM NQVGGGAGAA  60
AAAASGSATN WNGGIFQFQA SASNYNHPFG MNVCTNNNLQ PYNPNLYPMT SSHQILPKIP  120
IPALRKPVKI DGSDLRLGIG SRKALDHNMD PKKLKRVISN RLSAQRSRVK RLDHVSEMQR  180
KADEYQAETG KESIFFIDGD DDPYGQGIEI DLMKKPGEYP MFGWEIGIGP LNVDLNRSGD  240
SEQVPNQILT GPHRRNVSGI FGGIEQLLNM DPGWNPNPRN DDDMII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.23e-09bZIP family protein