PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO84526
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family ZF-HD
Protein Properties Length: 106aa    MW: 12205.4 Da    PI: 4.4533
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO84526genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer77.32e-242074459
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                 + Yk+C++NhA +lG   vDGC Ef p+++     + l+C ACgCHR+FHR+ev e
     OMO84526 20 TIYKDCMRNHASHLGLDIVDGCFEFAPKRNG-HADDELNCEACGCHRSFHRKEVME 74
                 68*************************9444.57899***************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MANNQRKPFE LIERETRTVT IYKDCMRNHA SHLGLDIVDG CFEFAPKRNG HADDELNCEA  60
CGCHRSFHRK EVMEKQIPLE SSDDEDEQGL GEVEDLDDDE VNKPKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.14e-15ZF-HD family protein