PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO84667

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

MYB_related

Protein Properties

Length: 168aa MW: 18752.7 Da PI: 4.0033

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO84667	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.2	4.4e-09	5	30	3	28
SS-HHHHHHHHHHHHHTTTT-HHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIa 28 +WT+eEd ll++++kq+G g W++++ OMO84667 5 AWTEEEDHLLKKCIKQYGEGKWHRVP 30 7**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence
MGGVAWTEEE DHLLKKCIKQ YGEGKWHRVP LLAETDQGQE NAMNSDIIRA EPRGNIGTTA 60 GSIMKPRSRD MVPDSSRQQA GIMEESSMSS TPFNNYVEFD QQGQEIVKEE DCGIGNLEEP 120 ASVGEYLAKD FGEFDQVNIL NSAATDAGCS KWEWEDLILD MDLWTDSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66380.1	5e-10	MYB family protein

Link Out ? help Back to Top
Ensembl	OMO84667