PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO84963
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family BES1
Protein Properties Length: 178aa    MW: 19825.2 Da    PI: 8.2321
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO84963genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822126.14.3e-3936127393
    DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasaspess 93 
               + r pt+ Er +nk+RERrRR ++ ki+aGL+++Gnyklpk+aD n+ lkALc+eAGw ve+DGt  rk +  + +e++++g s +++p+ +
  OMO84963  36 GYRFPTETERQKNKQRERRRRSVTQKIFAGLKQHGNYKLPKHADTNDLLKALCEEAGWHVEEDGTISRKNMLLQkTESSSMGDSIKVNPSCQ 127
               6799****************************************************************998777567788888887777655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MPMAEEKSSG VRGCIKKSKG PWVVHRTTKD GGVVTGYRFP TETERQKNKQ RERRRRSVTQ  60
KIFAGLKQHG NYKLPKHADT NDLLKALCEE AGWHVEEDGT ISRKNMLLQK TESSSMGDSI  120
KVNPSCQVIE DDDEDYCTCN HHGDFATSGT ILSLGLGQSH EFHGLNSLLS LSASTSYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.13e-18BES1 family protein