PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO85005
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family bZIP
Protein Properties Length: 200aa    MW: 22339.5 Da    PI: 10.0804
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO85005genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.82.6e-0999139444
               XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
    bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                k+ +r   NR +A +sR++K++++e+Le++v + +a+ +a
  OMO85005  99 PKKLKRVLANRASAHKSRLKKLEYVEKLEREVLVQQAKISA 139
               5899***************************9776666555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MPPKFQISTP MNTEGSNSSS SLDMTKLTSS LEATEPVKAL LHQGSASDSL TGVKRPCLVG  60
QGSSQSPHEV EISENSSSSL VGQTKPPKWS RSLDSEMDPK KLKRVLANRA SAHKSRLKKL  120
EYVEKLEREV LVQQAKISAL APEVAFKRAQ RNMLQQENDE MRRKMEILEK KKADKDAEFT  180
KLKHERDVLA LTRALQEEGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.23e-19bZIP family protein