PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO87343

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 202aa MW: 22624.5 Da PI: 9.9415

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO87343	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.9	3e-15	132	175	4	47
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 ++r +r++kNRe+A rsR+RK+a++ eLe +v+ L +eN +Lk OMO87343 132 DRRHKRMMKNRESAARSRARKQAYTNELELEVAHLIEENAKLKR 175 689***************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MEEVWKDISL TSLNDHSVIS NTNSNHSAFP SMIFQDFLAR PLNKELPPRR NSTVVSIAEE 60 TSPFGSLEPT PGTILSLNSG SDFQYLETTT VDPLRPNPAV MNGHGAPPFG SPTAFPSFCK 120 RRAQENNENS VDRRHKRMMK NRESAARSRA RKQAYTNELE LEVAHLIEEN AKLKRQQEVR 180 LLAAPPQLPK KSTLSRSLTA PF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	2e-54	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO87343