PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO87512

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 172aa MW: 19524.5 Da PI: 6.5206

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO87512	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	40.2	7.2e-13	37	94	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ +r+++NRe+ArrsR RK++ ++eL v +L + N + ++ ++++ + +++ OMO87512 37 RKRKRMESNRESARRSRMRKQKHLDELVGQVTQLRKDNNQILTSINFTTQHYLNIEAD 94 6789***********************************9999998888887776665 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MATSSGNSNS NSSGSSSATL LQNSGSEGDL QQLMDQRKRK RMESNRESAR RSRMRKQKHL 60 DELVGQVTQL RKDNNQILTS INFTTQHYLN IEADNSVLRA QVMELSQRLD SLTEILNFLN 120 NNNTTNNPMF HESDQHQGFE TSSSAADSFM INPFNMPYLN QPIMASPDIF QY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	58	RKRKRMESNRESARRSRMRKQK
2	50	57	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	7e-48	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO87512