PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO87676

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 242aa MW: 24720.4 Da PI: 8.2627

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO87676	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.9	4.5e-38	27	85	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 + l+cprCdst tkfCyynny+l+qPryfCk+CrryWt+GG+lrnvPvGgg+rk k+s OMO87676 27 DPLPCPRCDSTSTKFCYYNNYNLAQPRYFCKSCRRYWTQGGTLRNVPVGGGTRKASKRS 85 6789**************************************************88765 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MAADSGDRRP ARVPGNMASH PPPKLTDPLP CPRCDSTSTK FCYYNNYNLA QPRYFCKSCR 60 RYWTQGGTLR NVPVGGGTRK ASKRSRSSSV SSPSVATSSS SSVTNEAESM PLPTNPVSAM 120 PAPGVKPEMG MADVNLNEAV DLPVNGSFTS FLSSHGEGYL TLGGYGFGAA SGFDGVWGYP 180 GNGYLGGFSG GGGGGAGGAV GGATGCNTWQ PTSDVENGPG LVDGDCFGWP SLAISAPGKG 240 LK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47655.1	1e-27	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO87676