PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO89228
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family WRKY
Protein Properties Length: 119aa    MW: 13453 Da    PI: 4.4337
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO89228genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.63.8e-1193117125
               ---SS-EEEEEEE--TT-SS-EEEE CS
      WRKY   1 ldDgynWrKYGqKevkgsefprsYY 25 
               +dDg++WrKYG+K+vk+s++pr  Y
  OMO89228  93 MDDGFKWRKYGKKKVKNSPNPRLKY 117
               69********************655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    
MDLHQQEFDD DFLLNLTVFA AADHQNQNQN LPLLESLMTA STSSVVSDSC FSLEGPSNNS  60
CLDDLLPIDD DRDGESGVGF KVVFRTKSDI DVMDDGFKWR KYGKKKVKNS PNPRLKYLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.12e-14WRKY family protein