PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO91330
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family BES1
Protein Properties Length: 672aa    MW: 75554.5 Da    PI: 5.7618
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO91330genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822162.13.5e-50582012134
    DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl...eeaeaagssasaspesslq.ssl 98 
               g+g+++++kE+E++k+RER+RRai+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGw+ve+DGttyr   +p+   +++++ g++  +s+es+l+ ssl
  OMO91330  58 GKGKREREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEPDGTTYRLRHSPPaqpQHHQHLGAFPVRSVESPLSsSSL 158
               899******************************************************************66666557788999*************999** PP

    DUF822  99 kssalaspvesysaspksssfpspssldsislasa.......a 134
               k++++++ ++ + ++ + ++++sp+slds+ +a+         
  OMO91330 159 KNCSVKATLDCQPPVVRIDESLSPASLDSVVIAERdtrsekyP 201
               ********************************98865544443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 672 aa     Download sequence    
MQNPQSSNNA NQDPTIDAQP QPRRPRGFAA TAAAAAASGS PTGTSSGAGA ASTGSSSGKG  60
KREREKEKER TKLRERHRRA ITSRMLAGLR QYGNFPLPAR ADMNDVLAAL AREAGWTVEP  120
DGTTYRLRHS PPAQPQHHQH LGAFPVRSVE SPLSSSSLKN CSVKATLDCQ PPVVRIDESL  180
SPASLDSVVI AERDTRSEKY PSASPINSVE CLEADQLIQD VHSVEHENDF TGTQDVPVYI  240
KLSTGVINNF CQVADPESIR QELSHLKSLN VDGVIVDCWW GIIENWNPQK YVWSGYRELF  300
NIIREFNMKI QVVMAFHEYG GTDSANVLIS LPQWILEIGK ENQDIFFTDR EGRRTTECLS  360
WGIDKERVLN GRTGIEVYFD FMRSFRTEFD DLFAESLFSA VEIGLGPSGE LRYPSFSERM  420
GWRYPGIGEF QCYDKYLQQN LRKAAKLRGH SFWARGPDNA GQYNSRPHET GFFCERGDYD  480
SYYGRFFLQW YAQSLIDHAD NVLSLASLAF DETKIIVKVP AVYWWYKTSS HAAELTAGYY  540
NPTNQDGYSP VFEVLKKHSV TMKFVCSGLQ VCSYESDEAF ADPEGLSWQV LNSAWDRGLT  600
VAGENTLSCF DREGCLRIIE TAKPRNDPDR RHFSFFVYQQ PSPLVQGVIC FPDLDYFIKC  660
MHGDITGDLG PQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.10.0BES1 family protein