PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO93037

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

G2-like

Protein Properties

Length: 300aa MW: 32702.2 Da PI: 6.5207

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO93037	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109	2.4e-34	39	93	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYRl OMO93037 39 KPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 93 79****************************************************8 PP
2	Myb_DNA-binding	78	1.2e-24	41	92	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+ktI+rtmg kg+tl+++ks++qky+ OMO93037 41 RLRWTAELHERFVDAVTQLGGPdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 92 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MYSAIRSLPL DGSVGDFQGT LDGTNLPGDA CLVLTTDPKP RLRWTAELHE RFVDAVTQLG 60 GPDKATPKTI MRTMGVKGLT LYHLKSHLQK YRLGKQSCKE STENSKDESQ DTSSSTTSSS 120 RMVAQELNDG FQVTEALRVQ MEVQRRLHEQ LEVQRRLQLR IEAQGKYLQS ILEKACKALN 180 DQAAASAGLE AAREELSELA IKVSNDCQGM VPLDNIKLPS LSELAAALEN KTASSMPARI 240 GDCSVESCLT SIGSPVSPMG VGTQAAMMKK RPRPLFGNGE SLPLDGNIRQ EIEWGMPNIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	270	274	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	1e-119	G2-like family protein

Link Out ? help Back to Top
Ensembl	OMO93037