PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO93645

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 201aa MW: 22950.8 Da PI: 6.6036

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO93645	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.2	2.1e-14	85	142	5	62
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +++rr+++NRe+ArrsR RK++ ++eL v L +eN +L+++l++ ++ +++ +e OMO93645 85 RKQRRMISNRESARRSRMRKQKHLDELWSQVIRLRNENNSLIDKLNHVSECHDRVLQE 142 79********************************************998877666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MIPGELTGLH YLAPENPMMI PSNLGGMMQN TIPAFHFNRF LSSLPNSHTP QPAAYEFTPQ 60 SSSISNNSTS DEAEDVHQLS IIDERKQRRM ISNRESARRS RMRKQKHLDE LWSQVIRLRN 120 ENNSLIDKLN HVSECHDRVL QENARLKEEA SDLRQMLTDL KIGSPFSLAL RELEDQVPCN 180 TAHLRAESAN QSITNSIDLL H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	105	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13600.1	2e-42	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO93645