PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO94046
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family EIL
Protein Properties Length: 597aa    MW: 66893.6 Da    PI: 5.0895
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO94046genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3432.54e-132383691317
               XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
      EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvef 101
               +el+krmwkd+++lkr+ker+k    +++ a++++k + +++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gas+++raWWkekv+f
  OMO94046  38 DELEKRMWKDRIKLKRIKERQKIA--AQQ-AAEKQKPKSTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASENIRAWWKEKVKF 135
               79*************999999963..455.599******************************************************************** PP

               XXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG-- CS
      EIN3 102 drngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlk 202
               d+ngpaaisky+a++l++s+++s+  ++ + ++sl++lqD+tlgSLLsalmqhcdppqr++plek ++pPWWPtG+e+ww +lgl++ q+ ppykkphdlk
  OMO94046 136 DKNGPAAISKYEAECLAMSESDSN--KKGNLQSSLQDLQDATLGSLLSALMQHCDPPQRKYPLEKRIPPPWWPTGNEEWWVKLGLQEGQS-PPYKKPHDLK 233
               *******************88888..7899***********************************************************9.9********* PP

               HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XX......XXXXXXXXXXXXXXXXXXXXXXXXXX.XX CS
      EIN3 203 kawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ss......slrkqspkvtlsceqkedvegkkeskikh 294
               k+wkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l vl++ee+++++ s++   ss        r+++++  +s+++++dv+  ++   + 
  OMO94046 234 KMWKVGVLTAVIKHMSPDIAKIRRLVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDngtSSitetppGGRRNKKQPAVSSDSDYDVDDADDGVGSV 334
               *************************************************************66422777777667799999999999*****555544455 PP

               XXXXXXXX........................XXXXXXXXXXXXXXX CS
      EIN3 295 vqavktta........................gfpvvrkrkkkpses 317
               ++++++++                        g            e+
  OMO94046 335 SSKDDRRNqptdaepvayisnddshpvreqelG------------EK 369
               555555555666777777775544444433221............22 PP
Sequence ? help Back to Top
Protein Sequence    Length: 597 aa     Download sequence    
MGELEDIAAD ISSDLEVDDL RCENIAEKDV SDEEIEPDEL EKRMWKDRIK LKRIKERQKI  60
AAQQAAEKQK PKSTSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
ASENIRAWWK EKVKFDKNGP AAISKYEAEC LAMSESDSNK KGNLQSSLQD LQDATLGSLL  180
SALMQHCDPP QRKYPLEKRI PPPWWPTGNE EWWVKLGLQE GQSPPYKKPH DLKKMWKVGV  240
LTAVIKHMSP DIAKIRRLVR QSKCLQDKMT AKESAIWLGV LSREEALIRQ PSSDNGTSSI  300
TETPPGGRRN KKQPAVSSDS DYDVDDADDG VGSVSSKDDR RNQPTDAEPV AYISNDDSHP  360
VREQELGEKH PRKNKKRRLG SSYGDQQPGP SEEHVNTELR SPLPDINTDV SFLEYDIPGT  420
QQENNASTAF GHVETDLAVQ SQRVPESGYG HYPTIPSANN VSTQSMFVDG RPMLYPLLQD  480
GEMHHNAAYE FYNPSVEFRP GHDGQQSQME INVPQITPEN GVHVSASGRN ENEITGGELH  540
PYMEAIFPND QERAVHNPFG SPSDHSLFGA LNSPFGLGID DASLELYDDE LMEYFGA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1372379RKNKKRRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.10.0EIL family protein