PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO96005
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family ZF-HD
Protein Properties Length: 81aa    MW: 8793.86 Da    PI: 8.781
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO96005genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.53.3e-332379360
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                 +vrY eC+kNhAa++Gg+avDGC+Efm+s g+e+t  al+CaACgCHRnFHRreve+e
     OMO96005 23 NVRYGECQKNHAANIGGYAVDGCREFMAS-GDEATNGALTCAACGCHRNFHRREVETE 79
                 79**************************9.8889********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MKKRQVVLKS GRSSSTSSSV IRNVRYGECQ KNHAANIGGY AVDGCREFMA SGDEATNGAL  60
TCAACGCHRN FHRREVETEV V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.15e-36ZF-HD family protein