PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO96713
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GATA
Protein Properties Length: 173aa    MW: 18688.4 Da    PI: 10.5816
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO96713genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.79e-202660135
      GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
              C+ C+ttkTplWR gp g+k+LCnaCG++yrkk++
  OMO96713 26 CTDCKTTKTPLWRGGPAGPKSLCNACGIRYRKKRR 60
              ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MGVMDLRERK SSLSGDVTMN ENKKFCTDCK TTKTPLWRGG PAGPKSLCNA CGIRYRKKRR  60
AILGLSKGSE KKKEKSNSSN NNNSSGSTTC SDSTMVTANE GEKKSSGQLN GLSEPVKLRI  120
FALGSEVLLQ RSSAEAALSG VVKKQRCQRR RKLGEEEQAA FSLMALSCGS VFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.19e-23GATA family protein