PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO96784
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family FAR1
Protein Properties Length: 82aa    MW: 9481.73 Da    PI: 6.1002
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO96784genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.93.6e-0929794191
      FAR1 41 reeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
              r++++ k ++ +  +++e+r gC+ ++++ k+  +k++vt++++ HnH+++p
  OMO96784 29 RDKKHYKrENCKCGPKPESRKGCDVHMRILKR-GEKFVVTQFQTAHNHPMVP 79
              3333222234444599*************999.9***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MDKDEDMLDL NEAVDIIDED EEDGGAGERD KKHYKRENCK CGPKPESRKG CDVHMRILKR  60
GEKFVVTQFQ TAHNHPMVPK KL