PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO98031
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family B3
Protein Properties Length: 136aa    MW: 15642.1 Da    PI: 8.5028
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO98031genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.41.9e-1143933990
              EETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
        B3 39 edesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90
              + + g  W+v+l  + +++  v+++GW  F++a +Lk gD ++F++++r +++
  OMO98031 43 RGRPGYIWTVNL--ELRGNLLVFRSGWPAFARAMRLKIGDLCTFTFIEReDDG 93
              4566789*****..777777**************************9885555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MAIMMLHTII NNNKINGHYE NPGPNFLQSV PMHTPQECAF RKRGRPGYIW TVNLELRGNL  60
LVFRSGWPAF ARAMRLKIGD LCTFTFIERE DDGCVVIDAE RTRKSDLKKD DSPPPNITKF  120
VMWGEGDNEH LLKIIN