PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO99533
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family NAC
Protein Properties Length: 329aa    MW: 37544.5 Da    PI: 5.1944
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO99533genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM431.4e-13351885128
       NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkya.......tgkrknra.................... 77 
               +rF+Pt e ++++yL+  ++g++l+  ++++e+d+y   ePw+L +  ++++  w f + + k+ +       t      +                    
  OMO99533  35 VRFSPTGEVVLQCYLRDAINGQNLPS-DIFTEADLYGDkEPWKLFN-PNHSHPYWVFTHLKMKRDSvsvakqtT------Tkkkgkgnskakknreeeeek 127
               8************************9.99******97549****53.233334454444444433333321110......011233444444444556665 PP

       NAM  78 ....tksgyWkatgkdkevlskkgelvglkktLvfy.......kgrapkgektdWvmheyrl 128
                   +  g Wk    +  + s +ge+ g  +   f        +g++p+ ++ +W+mhe+++
  OMO99533 128 hdrtAGGGSWKGRSVHDILSSDDGEKLGFDREYKFKlnhddegRGSNPN-SNGNWIMHEFSI 188
               55548899***98887666666999999999999997777755556666.699*******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MWQGGKVPSV SDEMDSRVRN PHRRYDAVTV VTARVRFSPT GEVVLQCYLR DAINGQNLPS  60
DIFTEADLYG DKEPWKLFNP NHSHPYWVFT HLKMKRDSVS VAKQTTTKKK GKGNSKAKKN  120
REEEEEKHDR TAGGGSWKGR SVHDILSSDD GEKLGFDREY KFKLNHDDEG RGSNPNSNGN  180
WIMHEFSIKG CDLVICEIKN LKRKRKGTER DSHDLDDDSR VSKKLDVGDR DHQLQVCAIT  240
EEQAGLVDTP LPDDDDDFLK KLDVGDRDHQ LQVCPIPEEQ SGLVDAPVPD DDDDFVNSLL  300
NSEWDWNFIA SDREFSSPLQ QQQHIPLVF