PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMP00861

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 155aa MW: 18268.2 Da PI: 11.1196

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMP00861	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.5	2.5e-07	90	111	4	25
XCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKk 25 ++r +r++kNRe+A rsR+ K+ OMP00861 90 DRRHKRMMKNRESAARSRAGKQ 111 689***************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MEKIVWPLSS GSLRLASTDV RVNPIIWFNY FSNPMDVERC VNGTRRIGDI FRSQSMDYFK 60 FNEMVWDKKF QVFPSFPKKR AQENNENSVD RRHKRMMKNR ESAARSRAGK QVPVKADLPL 120 LCCVLLSNGI RDSLKAERRM LESFIKSKVR KQLRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	2e-11	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMP00861