PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMP00926

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 184aa MW: 21432 Da PI: 11.3337

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMP00926	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	22.1	3.2e-07	119	140	4	25
XCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKk 25 ++r +r++kNRe+A rsR+ K+ OMP00926 119 DRRHKRMMKNRESAARSRAGKQ 140 689***************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 184 aa Download sequence
MSSPFRTYPA RSAFIRTPAP PLFLTAATIM EKIVWPLSSG SLRLASTDVR VNPIIWFNYF 60 SNPMDVERCV NGTRRIGDIF RSQSMDYFKF NEMVWDKKFQ VFPSFPKKRA QENNENSVDR 120 RHKRMMKNRE SAARSRAGKQ VPVKADLPLL CCVLLSNGIR DSLKAERRML ESFIKSKVRK 180 QLRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	3e-11	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMP00926