PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMP00951
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family FAR1
Protein Properties Length: 151aa    MW: 17448.5 Da    PI: 4.9038
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMP00951genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.23.5e-10102145144
      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreee 44 
               +fY +Y++++GFsv+k+++++++r+ + + + fvC++eg+r+e+
  OMP00951 102 QFYITYGTHMGFSVKKETNHYNRRTCQLIGKLFVCTNEGSRKEK 145
               6****************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MSRFLLCEYL DGNLFVVGKR KQSRREGFDL NEALACEEDK YVADAEEDDA QNAGGDNLFG  60
LNVLREDERV PHPFFNEVDA RSLRPEDVVG KMVFDSVVEA TQFYITYGTH MGFSVKKETN  120
HYNRRTCQLI GKLFVCTNEG SRKEKWFNYP N